Information for 2-TWTWATGTGTCCCCCC (Motif 2)

A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C
Reverse Opposite:
C T A G A C T G C A T G A C T G C T A G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G A T T C G A C G A T G T C A
p-value:1e-14
log p-value:-3.302e+01
Information Content per bp:1.816
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.7 +/- 28.8bp
Average Position of motif in Background68.9 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TWTWATGTGTCCCCCC-
----CTGTCTGTCACCT
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TWTWATGTGTCCCCCC
-----TGGGGCCCAC-
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TWTWATGTGTCCCCCC
NNNNTTGTGTGCTTNN
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TWTWATGTGTCCCCCC----
---NNNNGGTACCCCCCANN
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TWTWATGTGTCCCCCC-
-----TGTCTGDCACCT
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TWTWATGTGTCCCCCC
GCGGAGGTGTCGCCTC
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:TWTWATGTGTCCCCCC
---------TCCCCA-
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TWTWATGTGTCCCCCC
------CTGTTCCTGG
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TWTWATGTGTCCCCCC-
------NCTTCCCGCCC
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TWTWATGTGTCCCCCC
---AATGTATCAAT--
 A C G T C G T A A G C T C G A T G T C A A C G T A C T G A C G T A C T G A C G T A G T C A G T C A G T C G T A C G T A C A G T C
A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T