Information for 4-TKSAATWGTGKKW (Motif 7)

A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
Reverse Opposite:
C G A T G T A C G T C A A G T C C G T A A G T C C G A T C G T A A C G T A C G T A T G C G T A C G T C A
p-value:1e-6
log p-value:-1.479e+01
Information Content per bp:1.823
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.2 +/- 24.1bp
Average Position of motif in Background61.1 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TKSAATWGTGKKW-
NNNCCATTGTGTNAN
 A C G T A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TKSAATWGTGKKW
NNATNAATTGTTTNN
 A C G T A C G T A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TKSAATWGTGKKW--
-AAAATTGTTATGAA
 A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TKSAATWGTGKKW--
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TKSAATWGTGKKW---
TTCAATTGTTCTAAAA
 A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TKSAATWGTGKKW
NNNTATTGAATTGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TKSAATWGTGKKW
--CCATTGTTNY-
 A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TKSAATWGTGKKW-
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TKSAATWGTGKKW
-CTCATTGTC---
 A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TKSAATWGTGKKW-
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C T G A T C G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T