Information for 2-AATTTCCATT (Motif 9)

G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T
Reverse Opposite:
G C T A G C T A C G A T C T A G A T C G G C T A C G T A G T C A A C G T C G A T
p-value:1e-9
log p-value:-2.221e+01
Information Content per bp:1.652
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif15.04%
Number of Background Sequences with motif3602.3
Percentage of Background Sequences with motif7.28%
Average Position of motif in Targets50.9 +/- 26.4bp
Average Position of motif in Background50.1 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AATTTCCATT
ATTTTCCATT
 G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AATTTCCATT
ATTTTCCATT
 G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AATTTCCATT
ATTTTCCATT
 G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AATTTCCATT
ATTTTCCATT
 G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AATTTCCATT
BTVATTWGCATA
 A C G T A C G T G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AATTTCCATT-
TAATTTGCATAA
 A C G T G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AATTTCCATT-
TTCATTTGCATAT
 A C G T A C G T G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AATTTCCATT
CTCATTTGCATW
 A C G T A C G T G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AATTTCCATT-
TAATTTGCATAA
 A C G T G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AATTTCCATT-
-ATTTGCATAA
 G C T A T G C A C A G T G C A T C G A T T A G C G A T C G C T A C G A T C G A T A C G T
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A