Information for 8-TCCTATAGGTRCC (Motif 22)

C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C
Reverse Opposite:
C T A G A C T G A G C T G T C A G T A C G A T C A C G T C G T A A G C T C G T A A C T G A C T G G C T A
p-value:1e-7
log p-value:-1.809e+01
Information Content per bp:1.734
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif33.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets32.9 +/- 19.1bp
Average Position of motif in Background45.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCCTATAGGTRCC---
TGCGCATAGGGGAGGAG
 A C G T C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCTATAGGTRCC
-ACTACAATTCCC
 C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C
A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCCTATAGGTRCC-
TGACCTNTAGTAACCC
 A C G T A C G T C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C A C G T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCCTATAGGTRCC---
TCGCGATAATTACCGAC
 A C G T C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCCTATAGGTRCC----
--GTATAAAAGGCGGGG
 C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCCTATAGGTRCC----
--GTATAAAAGGCGGGG
 C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PH0023.1_Dlx4/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCCTATAGGTRCC---
GCGCTATAATTACCGAC
 A C G T C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

Neurog1/MA0623.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TCCTATAGGTRCC
-ACCATATGGT--
 C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C
A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TCCTATAGGTRCC----
TGACCTAAAGTAACCTCTG
 A C G T A C G T C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C A C G T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TCCTATAGGTRCC-
--GGTTAGAGACCT
 C A G T T A G C A G T C C G A T C T G A A C G T C G T A C A T G C A T G C A G T T C G A A G T C A G T C A C G T
A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T