Information for 5-TACTTGAACTGTT (Motif 18)

A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A C T G C G A T A C G T A G T C C G T A C G T A A C T G A C G T C G T A
p-value:1e-8
log p-value:-2.072e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 4.0bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TACTTGAACTGTT
TGACCTTGACCT---
 A C G T A C G T A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TACTTGAACTGTT
CCACTTGAA-----
 A C G T A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TACTTGAACTGTT---
-NNATNAATTGTTTNN
 A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TACTTGAACTGTT
TAAGCCACTTGAAATT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TACTTGAACTGTT---
NNATTGGACTTTNGNN
 A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TACTTGAACTGTT
ATAACCACTTGAAAATT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TACTTGAACTGTT-
TACTTCCGCTTTTT
 A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T A C G T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TACTTGAACTGTT------
---TTGACCTTTTGACCTT
 A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

PB0068.1_Sox1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TACTTGAACTGTT-
NNNTATTGAATTGNNN
 A C G T A C G T A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TACTTGAACTGTT------
-CATTGACCTTTTGACCTC
 A C G T C G T A G T A C A C G T A C G T A C T G C G T A C G T A G T A C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C