Information for 2-AGAYACACAG (Motif 11)

C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G
Reverse Opposite:
A G T C A C G T A C T G C A G T A C T G C G A T T C A G A G C T G T A C C G A T
p-value:1e-9
log p-value:-2.293e+01
Information Content per bp:1.772
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif572.5
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets45.2 +/- 23.9bp
Average Position of motif in Background50.2 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGAYACACAG----
CGAAGCACACAAAATA
 A C G T A C G T C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGAYACACAG----
AGCGGCACACACGCAA
 A C G T A C G T C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAYACACAG-
AGCCACTCAAG
 C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGAYACACAG-
-----CACAGN
 C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAYACACAG
WWATRTAAACAN
 A C G T A C G T C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAYACACAG
AAATAAACA-
 C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGAYACACAG------
-CTCACACAATGGCGC
 C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGAYACACAG
----ACAAAG
 C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGAYACACAG
NTTGATACATT-
 A C G T A C G T C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAYACACAG
TBGCACGCAA
 C G T A A C T G T C G A A G T C C G T A A G T C G T C A A G T C C G T A T C A G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A