Information for 6-GAGTTGCTGVCATGGA (Motif 8)

C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A
Reverse Opposite:
A G C T A G T C G A T C C G T A A C G T A C T G A G T C A G T C C G T A A C T G A G T C G T C A C G T A A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.818
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.3 +/- 14.7bp
Average Position of motif in Background36.6 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0041.1_Mafb_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGTTGCTGVCATGGA
AAATTTGCTGACTTAGA
 A C G T C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAGTTGCTGVCATGGA
NGTAGGTTGGCATNNN
 C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

JUN/MA0488.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGTTGCTGVCATGGA
AAGATGATGTCAT---
 C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGTTGCTGVCATGGA--
----NGTTGCCATGGCAA
 C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGTTGCTGVCATGGA--
----GGTTGCCATGGCAA
 C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAGTTGCTGVCATGGA
----GGTTGGCAT---
 C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGTTGCTGVCATGGA
--GGTGYTGACAGS--
 C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A
A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GAGTTGCTGVCATGGA---
-----GTTGCCATGGNAAC
 C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAGTTGCTGVCATGGA
----ARNTGACA----
 C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTGCTGVCATGGA
AAAWWTGCTGACWWD--
 A C G T C T A G C G T A A C T G G C A T C A G T C T A G G T A C A C G T A C T G T C A G A G T C C G T A A C G T C T A G A C T G C T G A
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T