Information for 2-AAACATAYTGTGA (Motif 3)

C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
Reverse Opposite:
C A G T A G T C C G T A G T A C C G T A C T A G C G A T G T C A A C G T A C T G A G C T A G C T A C G T
p-value:1e-12
log p-value:-2.911e+01
Information Content per bp:1.772
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif49.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets55.5 +/- 26.1bp
Average Position of motif in Background51.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Neurog1/MA0623.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAACATAYTGTGA
-ACCATATGGT--
 C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAACATAYTGTGA
AAACATATGTTT-
 C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAACATAYTGTGA
AAGAACATWHTGTTC
 A C G T A C G T C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

OLIG3/MA0827.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAACATAYTGTGA
-ANCATATGGT--
 C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAACATAYTGTGA--
NNTCCTGCTGTGNNN
 C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

FOXP3/MA0850.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAACATAYTGTGA
GTAAACA--------
 A C G T A C G T C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAACATAYTGTGA
-AACATATGTT--
 C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T A C G T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAACATAYTGTGA
-ACCATATGGT--
 C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAACATAYTGTGA
AAAGTAAACAAAAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAACATAYTGTGA
-AACAKATGGY--
 C G T A C T G A T C G A G T A C C G T A A C G T C G T A A G T C A C G T A C T G C G A T A C T G G T C A
A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T