Information for 1-TAGMAACRKAWGG (Motif 2)

A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A A C G T G T A C A G C T A C T G A C G T A C G T A C G T A G T C A C G T C G T A
p-value:1e-12
log p-value:-2.934e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 20.6bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TAGMAACRKAWGG
CCGCATAGCAACGGA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAGMAACRKAWGG
SCCTAGCAACAG----
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TAGMAACRKAWGG
TACCATAGCAACGGT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TAGMAACRKAWGG-
----AACAGATGGT
 A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TAGMAACRKAWGG-
----AACAKATGGY
 A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TAGMAACRKAWGG-
----AACAGATGGC
 A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------TAGMAACRKAWGG-
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAGMAACRKAWGG-
----NACATATGGN
 A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Neurog1/MA0623.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAGMAACRKAWGG-
----ACCATATGGT
 A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TAGMAACRKAWGG
-AGAAACGAAAGT
 A C G T C G T A A C T G G T C A C G T A C G T A A G T C C T G A A C T G G T C A C G A T A C T G C T A G
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T