p-value: | 1e-7 |
log p-value: | -1.652e+01 |
Information Content per bp: | 1.913 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.84% |
Number of Background Sequences with motif | 1.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 47.2 +/- 26.6bp |
Average Position of motif in Background | 6.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.67 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0079.1_Sry_1/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GACATTWTMATGC-- NANTATTATAATTNNN |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GACATTWTMATGC---- --CTTTGTTATGCAAAT |
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PB0174.1_Sox30_2/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GACATTWTMATGC-- TAAGATTATAATACGG |
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OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GACATTWTMATGC---- --CATTGTTATGCAAAT |
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Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GACATTWTMATGC CTCATTTGCATW- |
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PB0069.1_Sox21_1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GACATTWTMATGC-- NNTAATTATAATNANN |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GACATTWTMATGC BTVATTWGCATA- |
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PB0064.1_Sox14_1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GACATTWTMATGC-- NNTAATTATAATTNNN |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GACATTWTMATGC ---ATTTGCATA- |
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Arid3a/MA0151.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GACATTWTMATGC -----TTTAAT-- |
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