Information for 5-GMTGCTGSTC (Motif 16)

A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C
Reverse Opposite:
C T A G C G T A A T G C A G T C C G T A C T A G A G T C G C T A A C G T A T G C
p-value:1e-8
log p-value:-1.955e+01
Information Content per bp:1.784
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.91%
Number of Background Sequences with motif229.8
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets46.4 +/- 24.2bp
Average Position of motif in Background53.4 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GMTGCTGSTC----
AGATGCTRCTRCCHT
 A C G T A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GMTGCTGSTC
AGCAGCTGCT-
 A C G T A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GMTGCTGSTC-----
NNANTGGTGGTCTTNNN
 A C G T A C G T A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GMTGCTGSTC
-CAGCTGNT-
 A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GMTGCTGSTC--
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GMTGCTGSTC--
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GMTGCTGSTC
NNAGCAGCTGCT-
 A C G T A C G T A C G T A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GMTGCTGSTC
ACATCCTGNT-
 A C G T A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GMTGCTGSTC---
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GMTGCTGSTC---
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A T C G G T C A C G A T T C A G G A T C A C G T A C T G A T C G A C G T A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G