Information for 4-CCACWATTCA (Motif 14)

A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A
Reverse Opposite:
A C G T A T C G G C T A C G T A A C G T C G A T A C T G A G C T C T A G A C T G
p-value:1e-9
log p-value:-2.095e+01
Information Content per bp:1.794
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.63%
Number of Background Sequences with motif169.1
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets53.6 +/- 24.1bp
Average Position of motif in Background47.4 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CCACWATTCA---
TACCCACAATGCATTG
 A C G T A C G T A C G T A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCACWATTCA------
AATCAATTCAATAATT
 A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCACWATTCA--
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCACWATTCA
-GACAATGNN
 A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCACWATTCA---
ATAAACAATTAAACA
 A C G T A C G T A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCACWATTCA-
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCACWATTCA-----
ACAAGCAATTAATGAAT
 A C G T A C G T A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCACWATTCA-----
ACAAGCAATTAATGAAT
 A C G T A C G T A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCACWATTCA
---CAATTAA
 A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A
A C G T A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCACWATTCA--
--GCAATAAAAA
 A G T C A G T C T C G A A G T C C G T A C G T A A C G T C G A T T A G C C G T A A C G T A C G T
A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A