Information for 3-CCCTGGATGGCTC (Motif 11)

G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C
Reverse Opposite:
A T C G G T C A A C T G A T G C A G T C C G T A A G C T A T G C A G T C C G T A A C T G C T A G A C T G
p-value:1e-10
log p-value:-2.334e+01
Information Content per bp:1.787
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif110.5
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets58.0 +/- 28.6bp
Average Position of motif in Background48.1 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCCTGGATGGCTC
-CGTGGGTGGTCC
 G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Znf423/MA0116.1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGATGGCTC
GCACCCCTGGGTGCC--
 A C G T A C G T A C G T A C G T G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGATGGCTC
RYHYACCTGB-------
 A C G T A C G T A C G T A C G T G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCTGGATGGCTC
-CTTGAGTGGCT-
 G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCCTGGATGGCTC-
GTCATGCHTGRCTGS
 A C G T G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCCTGGATGGCTC
ACCCGGATGTA--
 G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCCTGGATGGCTC----
--CTGATTGGTCNATTT
 G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCCTGGATGGCTC
CCCCCCCGGGGGGGT--
 A C G T A C G T A C G T A C G T G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCCTGGATGGCTC---
GTATTGGGTGGGTAATT
 A C G T G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGATGGCTC
NNCACCTGNN------
 A C G T A C G T A C G T G T A C G A T C A G T C A C G T A C T G A T C G C T G A C G A T A C T G A T C G G T A C C A G T A T G C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T