Information for 3-MMAATGMAAAKAAMWG (Motif 4)

T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C G T G T C A A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 30.8bp
Average Position of motif in Background53.0 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:MMAATGMAAAKAAMWG
-ATATGCAAATNNN--
 T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:MMAATGMAAAKAAMWG
-ATATGCAAAT-----
 T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:MMAATGMAAAKAAMWG
--WATGCAAATGAG--
 T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:MMAATGMAAAKAAMWG
--TATGCWAATBAV--
 T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:MMAATGMAAAKAAMWG
-TTATGCAAAT-----
 T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:MMAATGMAAAKAAMWG-
TAAATGTAAACAAAGGT
 T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:MMAATGMAAAKAAMWG-
AAAATGTAAACAAACAG
 T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:MMAATGMAAAKAAMWG-
AAAATGTAAACAAACAG
 T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-MMAATGMAAAKAAMWG
TTGTATGCAAATTAGA-
 A C G T T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:MMAATGMAAAKAAMWG-
AAAAAGTAAACAAAGAC
 T G C A G T A C C G T A C G T A A C G T A C T G G T A C C G T A C G T A C G T A A C G T C G T A G T C A G T A C C G A T A C T G A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C