p-value: | 1e-6 |
log p-value: | -1.392e+01 |
Information Content per bp: | 1.956 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 1.06% |
Number of Background Sequences with motif | 9.4 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 58.2 +/- 23.8bp |
Average Position of motif in Background | 51.8 +/- 23.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGGATGGCGC CGTGGGTGGTCC |
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Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGATGGCGC TGGGTGTGGC |
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ZNF354C/MA0130.1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGGATGGCGC GTGGAT----- |
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YY2/MA0748.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGGATGGCGC-- -TAATGGCGGNC |
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KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGGATGGCGC-- NNVDGGGYGGGGCYN |
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Klf4/MA0039.2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGATGGCGC TGGGTGGGGC |
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PB0113.1_E2F3_2/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGGATGGCGC------ NNNNTTGGCGCCGANNN |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGGATGGCGC ATGATKGATGRC-- |
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E2F1/MA0024.3/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGGATGGCGC---- --TTTGGCGCCAAA |
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KLF5/MA0599.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGATGGCGC GGGGNGGGGC |
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