Information for 5-AAGGTAAGGC (Motif 23)

C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.398e+00
Information Content per bp:1.530
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif12.63%
Number of Background Sequences with motif3922.3
Percentage of Background Sequences with motif7.97%
Average Position of motif in Targets54.0 +/- 25.7bp
Average Position of motif in Background50.1 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AAGGTAAGGC-
CAGGTAAGTAT
 C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Gata4/MA0482.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTAAGGC
NNGAGATAAGA-
 A C G T A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGGTAAGGC
CAGATAAGGN
 C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGGTAAGGC
-AGATAAGA-
 C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAGGTAAGGC
NVAGATAAGR-
 A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGGTAAGGC
NAGATAAGNN
 C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTAAGGC
TCAAGGTCAN--
 A C G T A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGTAAGGC
ANGNAAAGGTCA---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGGTAAGGC
TCAAGGTCAT--
 A C G T A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAGGTAAGGC
CAAGGHCANV-
 A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T