Information for 3-GCACCCTGCT (Motif 21)

C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C C G T A A T C G A T C G C A T G A C G T A C T G G A T C
p-value:1e-7
log p-value:-1.629e+01
Information Content per bp:1.824
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif123.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets61.4 +/- 25.3bp
Average Position of motif in Background51.3 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCACCCTGCT---
-CCCCCTGCTGTG
 C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCACCCTGCT----
GGCCYCCTGCTGDGH
 A C G T C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCACCCTGCT--
NNGCACCTTTCTCC
 A C G T A C G T C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCACCCTGCT----
----CCTGCTGAGH
 C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GCACCCTGCT-
------NGCTN
 C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCACCCTGCT---
GACCCCCCGCTGTG
 A C G T C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCACCCTGCT
ACATCCTGNT
 C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCACCCTGCT--
TGGCACCATGCCAA
 A C G T A C G T C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T A C G T A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GCACCCTGCT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCACCCTGCT------
CGAACAGTGCTCACTAT
 A C G T C T A G A G T C C G T A G T A C A T G C T A G C C G A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T