Information for 1-CAAGGGCTTT (Motif 19)

T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
Reverse Opposite:
G T C A T G C A C T G A T C A G A T G C G T A C G A T C G A C T A G C T A C T G
p-value:1e-8
log p-value:-1.864e+01
Information Content per bp:1.656
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif10.02%
Number of Background Sequences with motif2003.3
Percentage of Background Sequences with motif4.07%
Average Position of motif in Targets45.1 +/- 29.3bp
Average Position of motif in Background48.5 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGCTTT
NTCAAGGTCA--
 A C G T A C G T T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGCTTT
BTCAAGGTCA--
 A C G T A C G T T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGGGCTTT
CAAGGHCANV
 T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAAGGGCTTT
CNAGGCCT--
 T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAAGGGCTTT---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGCTTT
TTCAAGGTCAT-
 A C G T A C G T T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGCTTT
TCAAGGTCATA
 A C G T T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGCTTT
TCAAGGTCAT-
 A C G T T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------CAAGGGCTTT
NNAGGGACAAGGGCNC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGGCTTT
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T T G A C T C G A C T G A C T A G C A T G T A C G A G T C G A C T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C