Information for 6-CTCAGYASTGCAGGGT (Motif 15)

A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T
Reverse Opposite:
C G T A T A G C A T G C G A T C A C G T C A T G A T G C G T C A A T C G G A C T C T G A T A G C C G A T C T A G T C G A C T A G
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.607
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif4.21%
Number of Background Sequences with motif360.9
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets64.7 +/- 19.9bp
Average Position of motif in Background51.9 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ELF4/MA0641.1/Jaspar

Match Rank:1
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTCAGYASTGCAGGGT-
-----CACTTCCGGGTT
 A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T

ELF1/MA0473.2/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTCAGYASTGCAGGGT-
-----NACTTCCGGGTT
 A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T

ELF3/MA0640.1/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTCAGYASTGCAGGGT-
----TTACTTCCGGGTT
 A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T A C G T
A C G T A C G T A C G T A C G T G A C T G A C T C T G A G A T C C G A T A C G T T G A C A G T C A C T G A T C G A T C G C G A T C G A T

EHF/MA0598.2/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CTCAGYASTGCAGGGT-
-----TACTTCCGGGTT
 A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C A C G T C A G T A G T C A G T C A C T G A T C G A T C G C G A T C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTCAGYASTGCAGGGT-
-----CACAGCAGGGGG
 A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTCAGYASTGCAGGGT----
---NNNANTGCAGTGCNNTT
 A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CTCAGYASTGCAGGGT--
------AGGTCAAGGTCA
 A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PH0112.1_Nkx2-3/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGYASTGCAGGGT
CNTTAAGTACTTAANG--
 A C G T A C G T A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.49
Offset:10
Orientation:forward strand
Alignment:CTCAGYASTGCAGGGT----
----------CAAGGHCANV
 A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CTCAGYASTGCAGGGT---
----DCHCAGCAGGRGGCC
 A G T C A G C T A G T C C G T A A T C G A G C T C G T A T A G C A C G T T A C G G T A C T C G A C T A G T A C G A T C G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C