Information for 4-AWCTGARGSCAGACCT (Motif 7)

C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T
Reverse Opposite:
C T G A C T A G A T C G A G C T A G T C A C G T C A T G A T C G G A T C A G C T A C G T A G T C C G T A A C T G C G T A A C G T
p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.754
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.0 +/- 19.3bp
Average Position of motif in Background55.7 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:AWCTGARGSCAGACCT
--------CNAGGCCT
 C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AWCTGARGSCAGACCT
-----ATGCCAGACN-
 C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:AWCTGARGSCAGACCT
--------CTAGGCCT
 C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AWCTGARGSCAGACCT
NSTTATCTSHNNHNASATCT
 A C G T A C G T A C G T A C G T C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T
C G A T T A G C G A C T G C A T C G T A A C G T A G T C C G A T A T C G G A C T C A T G A G C T G C A T A T C G G T C A T A G C C G T A A C G T A G T C C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AWCTGARGSCAGACCT----
---CAAATCCAGACATCACA
 C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:AWCTGARGSCAGACCT--
--------CCAGACRSVB
 C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:AWCTGARGSCAGACCT-------
---------CAGGCCNNGGCCNN
 C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:AWCTGARGSCAGACCT
--------CCAGACAG
 C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:AWCTGARGSCAGACCT----
----NNGGCGACACCTCNNN
 C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-AWCTGARGSCAGACCT
TGACANARRCCAGRC--
 A C G T C G T A G C A T G T A C C G A T T A C G C G T A C T G A C T A G A T G C G A T C C G T A A C T G C T G A A T G C A G T C A G C T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T