Information for 8-GSCCCCAGACACCCTW (Motif 15)

C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
Reverse Opposite:
C G A T C T G A C A T G A T C G A T C G C G A T A C T G A C G T T A G C C G A T A C T G C T A G C T A G A C T G T A G C G A T C
p-value:1e-7
log p-value:-1.751e+01
Information Content per bp:1.646
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif88.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets42.2 +/- 25.1bp
Average Position of motif in Background53.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GSCCCCAGACACCCTW
CGCCCCCTGACA-----
 A C G T C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GSCCCCAGACACCCTW
CAAATCCAGACATCACA
 A C G T C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

RREB1/MA0073.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GSCCCCAGACACCCTW-----
-CCCCAAACCACCCCCCCCCA
 C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GSCCCCAGACACCCTW
----CCAGACRSVB--
 C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GSCCCCAGACACCCTW
----CCAGACAG----
 C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GSCCCCAGACACCCTW
------TGACACCT--
 C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GSCCCCAGACACCCTW
----ACTGAAACCA--
 C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GSCCCCAGACACCCTW
--CCYMATAAAA----
 C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GSCCCCAGACACCCTW
----GCTGTTACCCT-
 C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GSCCCCAGACACCCTW
------TCACACCT--
 C T A G A T C G G T A C A G T C A G T C G T A C C G T A A T C G G T C A G T A C C G T A A T G C T A G C G T A C G A C T G C T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T