Information for 5-KRYCCTGWGYTGASYT (Motif 10)

A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T
Reverse Opposite:
C T G A C T A G A T G C A C G T A T G C G T C A C T A G G T A C C G A T A G T C C G T A A C T G A C T G C T A G A G C T G T C A
p-value:1e-9
log p-value:-2.291e+01
Information Content per bp:1.816
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.5 +/- 9.7bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KRYCCTGWGYTGASYT
TGWCCTCARNTGACC-
 A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:KRYCCTGWGYTGASYT-
TGACCTTTCGTGACCTT
 A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-KRYCCTGWGYTGASYT
TGACCTTTGCATGACCT
 A C G T A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:KRYCCTGWGYTGASYT
---GCTGTG-------
 A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-KRYCCTGWGYTGASYT
TGACCTTTANTTGACCT
 A C G T A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:KRYCCTGWGYTGASYT
----ATGGGGTGAT--
 A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T
A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KRYCCTGWGYTGASYT---
TGACCTAAAGTAACCTCTG
 A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

SREBF1/MA0595.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:KRYCCTGWGYTGASYT
----GTGGGGTGAT--
 A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T
A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:KRYCCTGWGYTGASYT-
-------TGCTGACTCA
 A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:KRYCCTGWGYTGASYT
TGACCTNTAGTAACCC
 A C G T C T G A A G T C A G T C A G T C A C G T A C T G C G T A A C T G G A C T A C G T A T C G C G T A A T C G A G T C A G C T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C