Information for 6-AAATGGATTTATKGCT (Motif 8)

C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C G T A C C G T A A C G T C G T A G T C A C G T A A C G T A T G C G T A C C G T A A C G T A G C T A C G T
p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.796
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.8 +/- 13.3bp
Average Position of motif in Background50.5 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx2/MA0897.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT---
--ATTCNTTAATTGCTTGT
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT---
--ATTCNTTAATTGCTTGT
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

Hmx3/MA0898.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT---
--ATTNNTTAATTGCTTGT
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT---
--ATTNNTTAATTGCTTGT
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT---
--ANNCATTAATTGCTNGN
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT---
--ANNCATTAATTGCTNGN
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT
----TGATTTATGGCC
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT
----TGATTTATGGCC
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9/MA0485.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT
---NTGATTTATGGCC
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T
A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAATGGATTTATKGCT
----TGATTTATGGC-
 C G T A C T G A C G T A A C G T A C T G A T C G G T C A C G A T A C G T C G A T C G T A C G A T C A G T C T A G A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T