Information for 10-CAGGTTGGTGTCA (Motif 23)

A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A
Reverse Opposite:
A C G T A C T G G T C A A G T C C G T A A G T C A G T C G T C A C T G A A G T C A G T C A C G T A C T G
p-value:1e-6
log p-value:-1.526e+01
Information Content per bp:1.921
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 15.2bp
Average Position of motif in Background46.5 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAGGTTGGTGTCA-----
-TNNNNGGTGTCATNTNT
 A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAGGTTGGTGTCA
-----AGGTGTCA
 A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CAGGTTGGTGTCA--
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGGTTGGTGTCA
CAGGTGAGG----
 A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGGTTGGTGTCA
-----AGGTGTGA
 A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

T/MA0009.2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTTGGTGTCA
TCACACCTAGGTGTGA
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGGTTGGTGTCA
VCAGGTRDRY----
 A C G T A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGGTTGGTGTCA--
----AAGGTGTGAAA
 A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX19/MA0804.1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTTGGTGTCA--
TTTCACACCTAGGTGTGAAA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A A C G T A C G T
C G A T C A G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A G C T A G C T A

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGGTTGGTGTCA
-----AGGTGTGA
 A G T C C G T A A C T G A C T G A G C T A C G T A C T G A C T G A C G T A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A