Information for 8-RGCCAACAGAKMM (Motif 20)

C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
Reverse Opposite:
A C G T C A G T G T A C A C G T A T G C A C G T A C T G A C G T A C G T A C T G A C T G A G T C A G C T
p-value:1e-7
log p-value:-1.781e+01
Information Content per bp:1.866
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.6 +/- 27.0bp
Average Position of motif in Background62.9 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:RGCCAACAGAKMM
TGCCAA-------
 C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--RGCCAACAGAKMM
CGTGCCAAG------
 A C G T A C G T C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RGCCAACAGAKMM
-GTAAACAG----
 C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RGCCAACAGAKMM
GGTGCCAAGT-----
 A C G T A C G T C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RGCCAACAGAKMM
WAAGTAAAYA-----
 A C G T A C G T C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------RGCCAACAGAKMM
NNNVCTGWGYAAACASN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RGCCAACAGAKMM
ATGCCAACC-----
 A C G T C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RGCCAACAGAKMM
--NHAACBGYYV-
 C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RGCCAACAGAKMM
TATGTAAACANG---
 A C G T A C G T C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:RGCCAACAGAKMM
--CCAACTGCCA-
 C T A G A C T G A G T C G T A C C G T A C G T A A G T C C G T A A T C G C G T A A C G T G T A C G T C A
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T