Information for 8-ACTACAGGACAGAGCA (Motif 13)

C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G G T A C A C G T A G T C A C G T A T C G A C G T A T G C A G T C G C A T T A C G A G C T C G T A C T A G A C G T
p-value:1e-9
log p-value:-2.167e+01
Information Content per bp:1.776
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 26.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:1
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------ACTACAGGACAGAGCA
NNGAGGTTACTNNAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACTACAGGACAGAGCA-----
----AAGGCGAAATCATCGCA
 C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.50
Offset:2
Orientation:forward strand
Alignment:ACTACAGGACAGAGCA
--TAGGGCAAAGGTCA
 C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----ACTACAGGACAGAGCA
GGGTTACTANAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-ACTACAGGACAGAGCA
AATTAGTG---------
 A C G T C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:ACTACAGGACAGAGCA
-GTAGGGCAAAGGTCA
 C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A
A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.46
Offset:3
Orientation:forward strand
Alignment:ACTACAGGACAGAGCA
---TRAGGTCA-----
 C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:ACTACAGGACAGAGCA
--TGGGGCAAAGGTCA
 C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.45
Offset:-5
Orientation:forward strand
Alignment:-----ACTACAGGACAGAGCA
ATGTCACAACAACAC------
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.45
Offset:7
Orientation:forward strand
Alignment:ACTACAGGACAGAGCA-
-------CAAAGGTCAG
 C G T A A G T C C G A T C T G A A T G C C G T A A C T G A T C G G T C A A T G C C G T A C T A G G T C A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G