p-value: | 1e-9 |
log p-value: | -2.167e+01 |
Information Content per bp: | 1.928 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.83% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 61.5 +/- 14.9bp |
Average Position of motif in Background | 19.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAAGAATGGCATG GAACAATGGN--- |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAAGAATGGCATG RAACAATGGN--- |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAAGAATGGCATG AATGAACAATGGAATT |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAAGAATGGCATG VRAACAATGG---- |
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SOX9/MA0077.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAAGAATGGCATG GAACAATGG---- |
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PB0098.1_Zfp410_1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAAGAATGGCATG----- -TATTATGGGATGGATAA |
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TEAD4/MA0809.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAAGAATGGCATG NTGGAATGTN--- |
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Sox6/MA0515.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAAGAATGGCATG AAAACAATGG---- |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAAGAATGGCATG GGAACAAAGR---- |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAAGAATGGCATG NGAAGC-------- |
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