Information for 1-RGRYAGAATGTTCYRT (Motif 1)

T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T
Reverse Opposite:
C T G A A G C T C T G A T A C G G C T A C G T A G T A C C G T A A G C T A G C T A T G C G A C T C T A G A G C T G A T C A G C T
p-value:1e-16
log p-value:-3.804e+01
Information Content per bp:1.553
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif6.43%
Number of Background Sequences with motif431.6
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets46.0 +/- 23.8bp
Average Position of motif in Background51.7 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--RGRYAGAATGTTCYRT--
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:RGRYAGAATGTTCYRT
GRACAGWMTGTYCTB-
 T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:RGRYAGAATGTTCYRT--
---TAGAANVTTCTAGAA
 T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T A C G T A C G T
A C G T A C G T A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:RGRYAGAATGTTCYRT
GVACAGNMTGTYCTB-
 T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:RGRYAGAATGTTCYRT
GAACADWATGTTCTT-
 T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--RGRYAGAATGTTCYRT
GGGAACACAATGTTCCC-
 A C G T A C G T T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C A C G T

HSF1/MA0486.2/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:RGRYAGAATGTTCYRT--
-----GAACGTTCTAGAA
 T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF4/MA0771.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RGRYAGAATGTTCYRT
TTCTAGAACGTTC---
 T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T A C G T A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RGRYAGAATGTTCYRT
GGGTACATAATGTTCCC-
 A C G T A C G T T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RGRYAGAATGTTCYRT
AGNACANNNTGTNCTN-
 A C G T T C G A C T A G T C G A A G T C C T G A T A C G T C G A C T G A G C A T C A T G C G A T C G A T A G T C G A C T T C G A G A C T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T