Information for 19-GTGGGGCAVAGGGAGG (Motif 28)

A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C C G A T A T G C A G T C A G T C A C G T A C T G A C G T A C T G G A T C A G T C A G T C A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.863
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.5 +/- 16.1bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGGGGCAVAGGGAGG
-TGGGGCAAAGGTCA-
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGGGGCAVAGGGAGG
GTAGGGCAAAGGTCA-
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTGGGGCAVAGGGAGG
-TAGGGCAAAGGTCA-
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGGGGCAVAGGGAGG
GTGGGGGAGGGG----
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGGGGCAVAGGGAGG
--GGGGCCCAAGGGGG
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTGGGGCAVAGGGAGG
--GGAACAAAGR----
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTGGGGCAVAGGGAGG
AGGGGTCAGAGGTCA-
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTGGGGCAVAGGGAGG
GTGGGCCCCA------
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGGGGCAVAGGGAGG---
--AGGTCACGGAGAGGTCA
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGGGGCAVAGGGAGG----
--RGGTCADNNAGAGGTCAV
 A C T G C G A T A C T G A C T G A C T G C T A G A G T C C G T A T A G C C G T A A C T G A C T G T A C G C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C