Information for 17-TGCCACKGMSSRCCYT (Motif 26)

A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G A C T G A G C T T A C G T A C G C A T G A G T C G T A C C T A G A C G T A C T G A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.846
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 26.4bp
Average Position of motif in Background41.5 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGCCACKGMSSRCCYT
CGTGCCAAG---------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCCACKGMSSRCCYT
TTGCCAAG---------
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGCCACKGMSSRCCYT
GGTGCCAAGT--------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCACKGMSSRCCYT
TGCCAA----------
 A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCCACKGMSSRCCYT
ATGCCAACC--------
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGCCACKGMSSRCCYT---
----ANCGCGCGCCCTTNN
 A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGCCACKGMSSRCCYT---
----NTCGCGCGCCTTNNN
 A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TGCCACKGMSSRCCYT
ARNTGACA-----------
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TGCCACKGMSSRCCYT
VGCTGWCAVB---------
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TGCCACKGMSSRCCYT
AATCGCACTGCATTCCG-
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C A T G A C T G G T A C A T G C A T G C C T G A A G T C A G T C A G C T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T