Information for 8-RGAGARCWGAARCCAG (Motif 12)

C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G C T A G A G T C A G C T G A C T A G T C C G T A A T C G G A C T A G C T A T G C C G A T A G T C G A C T
p-value:1e-11
log p-value:-2.643e+01
Information Content per bp:1.705
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif91.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets52.3 +/- 27.6bp
Average Position of motif in Background49.4 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:RGAGARCWGAARCCAG
-----ACTGAAACCA-
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:RGAGARCWGAARCCAG
----------TGCCAA
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:RGAGARCWGAARCCAG
GGTCANYTGAGGWCA-
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:RGAGARCWGAARCCAG---
---------ATGCCAGACN
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:forward strand
Alignment:RGAGARCWGAARCCAG-
--------CGTGCCAAG
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:RGAGARCWGAARCCAG---
-------ACTAGCCAATCA
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:RGAGARCWGAARCCAG
-GAGAACCGAAACTG-
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:RGAGARCWGAARCCAG
-CGGAAGTGAAAC---
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:RGAGARCWGAARCCAG
-ATAAACCGAAACCAA
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G
A C G T C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:RGAGARCWGAARCCAG--
---TGACANARRCCAGRC
 C T G A C T A G C G T A A T C G C T G A C T G A A T G C G C A T A C T G C T G A C T G A C T A G A G T C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C