Information for 2-RARYCARCWGWGWTCC (Motif 3)

C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
Reverse Opposite:
C T A G C T A G C G T A C G T A A T G C C G A T A G T C C G T A A C T G A G T C A C G T A C T G C T G A A G T C A C G T G A C T
p-value:1e-11
log p-value:-2.710e+01
Information Content per bp:1.820
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 20.4bp
Average Position of motif in Background69.1 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RARYCARCWGWGWTCC
-NAHCAGCTGD-----
 C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RARYCARCWGWGWTCC-
--GTCWGCTGTYYCTCT
 C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C A C G T
A C G T A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

TFAP4/MA0691.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:RARYCARCWGWGWTCC
--ATCAGCTGTT----
 C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
A C G T A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:RARYCARCWGWGWTCC
---CCAGCTGTTN---
 C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:RARYCARCWGWGWTCC
--ANCAGCTG------
 C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:RARYCARCWGWGWTCC
--NVCAGCTGBBNN--
 C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:RARYCARCWGWGWTCC
----CAGCTGTT----
 C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RARYCARCWGWGWTCC
TGAGTCAGCA-------
 A C G T C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---RARYCARCWGWGWTCC
GCTGAGTCAGCAATTTTT-
 A C G T A C G T A C G T C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:RARYCARCWGWGWTCC
AAGTCAGCANTTTTN-
 C T G A C G T A T C A G A G C T A G T C C G T A C T A G A G T C C G A T A C T G C G T A A T C G C G A T C G A T A G T C A G T C
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T