Information for 1-SSSSGYTTCCSGGAAR (Motif 1)

A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A
Reverse Opposite:
G A C T A C G T A C G T G A T C G A T C T A G C C T A G C A T G T G C A G T C A T C A G T A G C A T G C T A G C A T C G T A G C
p-value:1e-40
log p-value:-9.250e+01
Information Content per bp:1.567
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif29.47%
Number of Background Sequences with motif1341.3
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets55.1 +/- 21.0bp
Average Position of motif in Background51.4 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.92
Offset:4
Orientation:forward strand
Alignment:SSSSGYTTCCSGGAAR
----NTTTCCNGGAAA
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A
A C G T A C G T A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.91
Offset:3
Orientation:forward strand
Alignment:SSSSGYTTCCSGGAAR-
---NNCTTCCNGGAAGN
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A A C G T
A C G T A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.91
Offset:5
Orientation:forward strand
Alignment:SSSSGYTTCCSGGAAR---
-----TTTCCAGGAAATGG
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.90
Offset:5
Orientation:forward strand
Alignment:SSSSGYTTCCSGGAAR
-----CTTCCNGGAA-
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:5
Score:0.90
Offset:3
Orientation:forward strand
Alignment:SSSSGYTTCCSGGAAR-
---NATTTCCNGGAAAT
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A A C G T
A C G T A C G T A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.89
Offset:5
Orientation:forward strand
Alignment:SSSSGYTTCCSGGAAR
-----CTTCTGGGAAA
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.89
Offset:5
Orientation:forward strand
Alignment:SSSSGYTTCCSGGAAR
-----TTTCCAGGAAA
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.86
Offset:6
Orientation:reverse strand
Alignment:SSSSGYTTCCSGGAAR-
------TTCTTGGAAAN
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.86
Offset:5
Orientation:reverse strand
Alignment:SSSSGYTTCCSGGAAR-
-----TTTCTNAGAAAN
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.84
Offset:5
Orientation:reverse strand
Alignment:SSSSGYTTCCSGGAAR----
-----TTTCCTGGAAAGNNN
 A T C G T A G C A T C G T A C G A T C G A G T C A C G T A C G T G T A C G A T C A T C G C T A G C T A G T G C A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A