Information for 18-CGGTCCATGGACCGGG (Motif 33)

A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G
Reverse Opposite:
A G T C A T G C A G T C A T C G A C T G G A C T A T G C A G T C C G T A A C G T A C T G A T C G G T C A A G T C A G T C A C T G
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.902
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.0 +/- 16.3bp
Average Position of motif in Background58.5 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGGTCCATGGACCGGG-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGGTCCATGGACCGGG
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CGGTCCATGGACCGGG
NAGGTCANTGACCT---
 A C G T A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CGGTCCATGGACCGGG
NTGCCCTTGGGCGN--
 A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CGGTCCATGGACCGGG
GGGGTCAAAGGTCA---
 A C G T A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CGGTCCATGGACCGGG
GGGGTCAAAGGTCA---
 A C G T A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.46
Offset:0
Orientation:forward strand
Alignment:CGGTCCATGGACCGGG
AAGTTCAAGGTCAGC-
 A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:CGGTCCATGGACCGGG----
----NNAGGGACAAGGGCNC
 A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.46
Offset:3
Orientation:forward strand
Alignment:CGGTCCATGGACCGGG
---NTCAAGGTCA---
 A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CGGTCCATGGACCGGG
GAGGTCAAAGGTCA---
 A C G T A G T C A C T G A C T G A C G T A T G C A G T C G T C A G A C T A C T G A T C G C T G A A G T C A T G C C T A G A T C G C T A G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T