Information for 2-KGTTCAGTSTCAT (Motif 5)

A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T
Reverse Opposite:
C G T A A G C T A C T G C T G A A T G C C T G A A G T C A C G T C T A G C G T A C G T A G A T C G T C A
p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.673
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif266.5
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets59.0 +/- 24.3bp
Average Position of motif in Background48.1 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---KGTTCAGTSTCAT-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KGTTCAGTSTCAT
--TTCAAGGTCAT
 A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T
A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:KGTTCAGTSTCAT
---TCAGTCTT--
 A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T
A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--KGTTCAGTSTCAT---
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KGTTCAGTSTCAT--
CTTTCANTATGACTV
 A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

SOX8/MA0868.1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----KGTTCAGTSTCAT
AACAATGTGCAGTGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-KGTTCAGTSTCAT
AGTTTCAGTTTC--
 A C G T A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KGTTCAGTSTCAT
-BTBRAGTGSN--
 A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KGTTCAGTSTCAT
-CTYRAGTGSY--
 A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-KGTTCAGTSTCAT
ACTTTCACTTTC--
 A C G T A C G T C A T G A C G T G C A T A G T C C G T A C T A G A G C T A T C G A G C T T A G C C T G A G A C T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T