Information for 3-TTTCAGCGCCAYTTCT (Motif 4)

A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T
Reverse Opposite:
T C G A T A C G G C T A C G T A C T G A A C G T A C T G A C T G A G T C C A T G T A G C C G A T A C T G C G T A C G T A G T C A
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.652
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif209.7
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets47.6 +/- 18.1bp
Average Position of motif in Background52.4 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTTCAGCGCCAYTTCT
---GTCCGCCATTA--
 A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T
A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCAGCGCCAYTTCT
TCNCTTTACAGCGNNNT----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCAGCGCCAYTTCT
TCNNTTTACAGCGNNNT----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCAGCGCCAYTTCT
TCNNTTTACAGCGNNNT----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGCGCCAYTTCT
SCTGTCARCACC------
 A C G T A C G T A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TTTCAGCGCCAYTTCT-
-------ACCACTTGAA
 A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PB0108.1_Atf1_2/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTTCAGCGCCAYTTCT
NTTATTCGTCATNC--
 A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TTTCAGCGCCAYTTCT
------MRSCACTYAA
 A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TTTCAGCGCCAYTTCT-
--------CCACTTGAA
 A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TTTCAGCGCCAYTTCT
AGGAGACCCCCAATTTG
 A C G T A C G T C G A T C G A T G T A C C G T A A C T G G T A C T A C G T A G C A G T C G T C A A G C T A C G T C A G T A G T C A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G