Information for 22-TTTAAGAGGG (Motif 35)

A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-7.632e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TTTAAGAGGG--
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAGAGGG
NTTTTACGAGN-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTTAAGAGGG--
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGAGGG----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTAAGAGGG
-TTAAGTGGT
 A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTAAGAGGG
-TTAAGTGGN
 A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGAGGG---
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTTAAGAGGG
TTTTATKRGG-
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGAGGG----
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTAAGAGGG
NTCAAGTGGN
 A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T