Information for 2-GRMCYYWRRSASGSWC (Motif 3)

A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
Reverse Opposite:
A C T G C G T A A T C G A G T C A T G C A C G T A T C G A G T C A G T C G C A T C T G A C T G A A C T G A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.748
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.7 +/- 17.2bp
Average Position of motif in Background22.0 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GRMCYYWRRSASGSWC
CGCCCCCTGACA-----
 A C G T A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GRMCYYWRRSASGSWC
CTGACCTTTG--------
 A C G T A C G T A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GRMCYYWRRSASGSWC
------TBGCACGCAA
 A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GRMCYYWRRSASGSWC
NNNNTGACCTTTNNNN-----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GRMCYYWRRSASGSWC
NNNGTGACCTTTGNNN-----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GRMCYYWRRSASGSWC
NNATTGGACTTTNGNN-----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----GRMCYYWRRSASGSWC
CNNTTGACCTTTG--------
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GRMCYYWRRSASGSWC
TGACCTYA---------
 A C G T A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GRMCYYWRRSASGSWC
TGACCYCT---------
 A C G T A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:GRMCYYWRRSASGSWC-
--TCCCAGMCRAGCCCC
 A C T G C T A G G T A C A G T C A G C T A G C T C G A T C T A G C T A G A T G C C G T A A T C G A C T G A T G C C G A T A G T C A C G T
A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C