Information for 1-CCTTAGGACTTTA (Motif 2)

A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
Reverse Opposite:
A C G T G T C A C T G A G T C A A T C G A C G T A G T C A G T C C G A T C G T A C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.224e+01
Information Content per bp:1.819
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.7 +/- 22.4bp
Average Position of motif in Background19.7 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCTTAGGACTTTA
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCTTAGGACTTTA
TATCATTAGAACGCT-
 A C G T A C G T A C G T A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTTAGGACTTTA
CCTTTGAWGT---
 A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTTAGGACTTTA
GCCTCAGGGCAT--
 A C G T A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGACTTTA
ANTCCCTNGGGAAT---
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCTTAGGACTTTA
SCCTSAGGSCAW--
 A C G T A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCTTAGGACTTTA---
NNATTGGACTTTNGNN
 A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTTAGGACTTTA
TGGACTTTGNNCTCN-
 A C G T A C G T A C G T A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAGGACTTTA
TCCCNNGGGACN---
 A C G T A C G T A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTTAGGACTTTA
CCTTTGATCTTT-
 A G T C A G T C A C G T C G A T C G T A A C T G A C T G C G T A A T G C A C G T A G C T A C G T G T C A
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T