Information for 7-BTSCCCMSAGMCGGGG (Motif 8)

A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G
Reverse Opposite:
A T G C A G T C G T A C G A T C C T A G A C G T A T G C C A G T A T C G A C G T T C A G T A C G C T A G A T G C T C G A T C G A
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.617
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.79%
Number of Background Sequences with motif1096.9
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets48.0 +/- 24.5bp
Average Position of motif in Background50.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:BTSCCCMSAGMCGGGG
-TGCCCCCGGGCA---
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:BTSCCCMSAGMCGGGG---
-----CACAGCGGGGGGTC
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:BTSCCCMSAGMCGGGG-
-----CACAGCAGGGGG
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:BTSCCCMSAGMCGGGG
-CGCCCCCTGACA---
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G
A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:BTSCCCMSAGMCGGGG---
----DCHCAGCAGGRGGCC
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:BTSCCCMSAGMCGGGG
-TGCCCCAGGGCA---
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G
A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:BTSCCCMSAGMCGGGG
------CCAGACAG--
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:BTSCCCMSAGMCGGGG---
----NCGCAGCGGGGGGTC
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:BTSCCCMSAGMCGGGG
-TGCCCCAGGGCA---
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:BTSCCCMSAGMCGGGG
--CACCCCCGGGGGGG
 A G C T A G C T A T C G G A T C A T G C A G T C T G C A A T G C G T C A A T C G T G C A G A T C C T A G C A T G T C A G A T C G
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G