Information for 22-AAMAAARCAGCTT (Motif 42)

G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T
Reverse Opposite:
T C G A G C T A A T C G A G T C C A G T A T C G A G C T A C G T A G C T G C A T A C G T C G A T C G A T
p-value:1e-6
log p-value:-1.547e+01
Information Content per bp:1.577
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif259.2
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets49.1 +/- 28.1bp
Average Position of motif in Background47.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAMAAARCAGCTT
-----CACAGN--
 G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAMAAARCAGCTT
-AAACCACAGC--
 G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAMAAARCAGCTT
-----AACAGCTG
 G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAMAAARCAGCTT
-AAATCACAGCA-
 G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:AAMAAARCAGCTT
-------CAGCC-
 G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AAMAAARCAGCTT-
----NAACAGCTGG
 G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T A C G T
A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAMAAARCAGCTT---
-----AACAGCTGCAG
 G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AAMAAARCAGCTT-
----CAGCAGCTGN
 G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T A C G T
A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAMAAARCAGCTT
GTTAAAAAAAAAAATTA-
 A C G T A C G T A C G T A C G T A C G T G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AAMAAARCAGCTT
-----ANCAGCTG
 G C T A G C T A T G C A C G T A T C G A T G C A T C G A T A G C G T C A T C A G T A G C C G A T A G C T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G