Information for 19-AGTGAATGGACAA (Motif 37)

C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C G T A G T C C G T A A G T C A C G T
p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 18.1bp
Average Position of motif in Background54.3 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGTGAATGGACAA-
ACTATGAATGAATGAT
 A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGTGAATGGACAA
NNNTATTGAATTGNNN-
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTGAATGGACAA
GAAAGTGAAAGT----
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGTGAATGGACAA-
----AATGGAAAAT
 C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGTGAATGGACAA-
----NATGGAAAAN
 C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTGAATGGACAA
-GTTAATGGCC--
 C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGTGAATGGACAA-
--TGATTGGCTANN
 C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGAATGGACAA
NNTNTCATGAATGT----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGTGAATGGACAA
AGAAAGTGAAAGTGA--
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------AGTGAATGGACAA
NNNNTGCCAGTGATTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G C T A G C G T A G T A C G T C A C G T A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T A C G T