Information for 18-CTCGCTTTACTGT (Motif 36)

A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C G T C G T A C G T A C G T A A C T G A T G C T C A G C G T A C T A G
p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.2 +/- 27.4bp
Average Position of motif in Background71.0 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCGCTTTACTGT-
--DGWTTTATGRCN
 A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTCGCTTTACTGT-
----ATTTCCTGTN
 A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCGCTTTACTGT----
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCGCTTTACTGT
-TNCCTTTGATGT
 A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTCGCTTTACTGT-
----ATTTCCTGTN
 A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCGCTTTACTGT--
-TNCCTTTGATCTTN
 A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCGCTTTACTGT
GTCATGCHTGRCTGS
 A C G T A C G T A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCGCTTTACTGT--
CTTTGTTTACTTTTN
 A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCGCTTTACTGT
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PAX9/MA0781.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCGCTTTACTGT-
CGTCACGCATGACTGCA
 A C G T A C G T A C G T A G T C A C G T A G T C A T C G A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A