Information for 15-CTTTCCTAATBAG (Motif 34)

A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G
Reverse Opposite:
G T A C C A G T T G C A C G T A G C A T A C G T C G T A A C T G T A C G T C G A T C G A C G T A A T C G
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.646
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif261.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets42.8 +/- 26.3bp
Average Position of motif in Background49.8 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0097.1_Lhx6_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTTTCCTAATBAG-----
-TCCACTAATTAGCGGTT
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

PH0031.1_Evx1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTTTCCTAATBAG-----
-AGAACTAATTAGTGGAC
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C A G G C T A T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T A T C G T A C G C G T A T A G C

PH0155.1_Prrx2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTTTCCTAATBAG----
NTTCGCTAATTAGCTNT
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

LHX6/MA0658.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTTTCCTAATBAG-
----ACTAATTAGC
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G A C G T
A C G T A C G T A C G T A C G T T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C

PH0058.1_Hoxb3/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTTTCCTAATBAG-----
-TGAGCTAATTAGTTGGA
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

PH0036.1_Gsx2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTTCCTAATBAG---
NTNNGCTAATTANCNT
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G A C G T A C G T A C G T
G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T

NOTO/MA0710.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTTTCCTAATBAG-
----NNTAATTAGN
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G A C G T
A C G T A C G T A C G T A C G T T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

EMX2/MA0886.1/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTTTCCTAATBAG-
----NCTAATTANN
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G A C G T
A C G T A C G T A C G T A C G T T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTTTCCTAATBAG
----NCTAATTA-
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G
A C G T A C G T A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T

PH0027.1_Emx2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTTTCCTAATBAG-----
-ACCACTAATTAGTGGAC
 A T G C C G A T A G C T A G C T A T G C A G T C C G A T T G C A C G T A G A C T A C G T G T C A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T A G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G T A C G G C T A A G T C