Information for 13-AGSAGWCGSACCW (Motif 29)

C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G A C G T A T C G A G T C A T C G C G T A A G T C A C G T A T G C A G T C A C G T
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.874
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 12.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGSAGWCGSACCW
AGCAACAGCCGCACC-
 A C G T A C G T A C G T C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGSAGWCGSACCW
NTNNNAGGAGTCTCNTN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGSAGWCGSACCW
-CCAGACRSVB--
 C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGSAGWCGSACCW
GCGGAGGTGTCGCCTC-
 A C G T A C G T A C G T A C G T C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGSAGWCGSACCW
-CCAGACAG----
 C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGSAGWCGSACCW---
TCTTTGGCGTACCCTAA
 A C G T C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGSAGWCGSACCW
-----TCACACCT
 C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGSAGWCGSACCW
ADGGYAGYAGCATCT
 A C G T A C G T C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGSAGWCGSACCW
-----TCACACCT
 C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGSAGWCGSACCW
-----TCACACCT
 C G T A A C T G A T C G C G T A A C T G G C A T A T G C A C T G A T G C C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T