Information for 18-GCDGCTTTGKTGGCAG (Motif 25)

A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G
Reverse Opposite:
A G T C C G A T A T C G G T A C A G T C C G T A G T C A G T A C C G T A C G T A C T G A A C T G A G T C G A T C A C T G G T A C
p-value:1e-9
log p-value:-2.183e+01
Information Content per bp:1.754
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.0 +/- 18.4bp
Average Position of motif in Background47.2 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.56
Offset:9
Orientation:forward strand
Alignment:GCDGCTTTGKTGGCAG
---------TTGGCA-
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GCDGCTTTGKTGGCAG-
--------NTTGGCANN
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCDGCTTTGKTGGCAG
-----TTTTATGGCTN
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCDGCTTTGKTGGCAG
-------TNNGGGCAG
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCDGCTTTGKTGGCAG
---CCWTTGTYYB---
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCDGCTTTGKTGGCAG
GGGGCTYGKCTGGGA-
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCDGCTTTGKTGGCAG-
NNNNNATTGATGNGTGN
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GCDGCTTTGKTGGCAG
--------CTTGGCAA
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCDGCTTTGKTGGCAG
GCNGCCATCTTG----
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GCDGCTTTGKTGGCAG-
-------NNTTGGCANN
 A C T G T G A C C A T G A C T G A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A T G C G C T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C