Information for 2-GAGGGGAGGCTCCCCT (Motif 2)

T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G C T A G C T A G A C T G C G T A A T C G A T G C A G T C A G C T T G A C A G T C G T A C G T A C C A G T A T G C
p-value:1e-14
log p-value:-3.305e+01
Information Content per bp:1.784
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.2 +/- 24.1bp
Average Position of motif in Background59.3 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GAGGGGAGGCTCCCCT
---GGGGGAATCCCC-
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAGGGGAGGCTCCCCT--
--TTGGGGGCGCCCCTAG
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAGGGGAGGCTCCCCT
---AGGGGATTCCCCT
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGGGGAGGCTCCCCT
---AGGGGAATCCCCT
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.58
Offset:10
Orientation:reverse strand
Alignment:GAGGGGAGGCTCCCCT
----------TCCCCA
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GAGGGGAGGCTCCCCT-------
------NTCNTCCCCTATNNGNN
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGGGGAGGCTCCCCT
-TGGGGAAGGGCM---
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGGGGAGGCTCCCCT
GTGGGGGGGG------
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T
C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGGGGAGGCTCCCCT
--GGGGGGGG------
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GAGGGGAGGCTCCCCT
--------GCTCCG--
 T A C G G T C A A C T G A C T G A C T G A C T G C T G A A C T G A T C G A T G C C G A T A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T