Information for 13-CGTGCAGCGTTGCTGC (Motif 18)

G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
Reverse Opposite:
A C T G G A T C T C G A A C T G A T G C T C G A C T G A G T A C A C T G A G T C C G A T A C T G A T G C G T C A T G A C C A T G
p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.679
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif38.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets42.5 +/- 27.0bp
Average Position of motif in Background44.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGTGCAGCGTTGCTGC
--NGAAGC--------
 G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CGTGCAGCGTTGCTGC
----CAGCC-------
 G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCAGCGTTGCTGC
NNNANTGCAGTGCNNTT--
 A C G T A C G T A C G T G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CGTGCAGCGTTGCTGC
GCCGCGCAGTGCGT----
 A C G T A C G T G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CGTGCAGCGTTGCTGC----
-GTCACGCTTGGCTGCNCNN
 G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C A C G T A C G T A C G T A C G T
A C G T C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCAGCGTTGCTGC
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CGTGCAGCGTTGCTGC
NGTCACGCTTGGCTGC
 G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCAGCGTTGCTGC
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CGTGCAGCGTTGCTGC
RTACGTGC-----------
 A C G T A C G T A C G T G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CGTGCAGCGTTGCTGC
TNNGGGCAG---------
 A C G T A C G T G A T C A C T G C A G T A T C G T G A C C G T A A C T G T G A C C A T G G A C T A G C T T A C G T G A C A C G T C A T G A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T