Information for 12-TGAGGTGGKWGKCAAG (Motif 16)

A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T A C T G G T A C A G T C C G T A G T C A A G T C A G T C C G T A A G T C A G T C A G C T A G T C G T C A
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.892
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.1 +/- 21.0bp
Average Position of motif in Background48.8 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGAGGTGGKWGKCAAG
--AGGTGNCAGACAG-
 A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAGGTGGKWGKCAAG
NTCGGTGGTCGC----
 A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGAGGTGGKWGKCAAG
--AGGTGHCAGACA--
 A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGAGGTGGKWGKCAAG
-TCGGTGGTCGCN---
 A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G
A C G T A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGAGGTGGKWGKCAAG
TTCGGTGGTCGC----
 A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGAGGTGGKWGKCAAG
NGATGACGTGGCAN-----
 A C G T A C G T A C G T A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGAGGTGGKWGKCAAG--
--NGTAGGTTGGCATNNN
 A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGAGGTGGKWGKCAAG
--AGGTGTGA------
 A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGAGGTGGKWGKCAAG
--AGGTGTCA------
 A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TGAGGTGGKWGKCAAG---
--------AAGGCAAGTGT
 A C G T A C T G C T G A A C T G A C T G A C G T A C T G A C T G A C G T C G A T C T A G A C T G A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T