p-value: | 1e-10 |
log p-value: | -2.513e+01 |
Information Content per bp: | 1.777 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.80% |
Number of Background Sequences with motif | 3.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 48.3 +/- 33.2bp |
Average Position of motif in Background | 38.5 +/- 17.2bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0112.1_Nkx2-3/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACTAMRTCCTTM--- CNTTAAGTACTTAANG |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACTAMRTCCTTM--- NATTTAAGTACTTANNA |
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PH0125.1_Obox5_2/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CACTAMRTCCTTM-- GATAATTAATCCCTCTT |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CACTAMRTCCTTM GGCCATAAATCAC-- |
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PH0130.1_Otx2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CACTAMRTCCTTM-- GANNATTAATCCCTNNN |
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PH0008.1_Barx2/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CACTAMRTCCTTM NANAANTAATTANTTA |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CACTAMRTCCTTM MRSCACTYAA------ |
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PH0039.1_Mnx1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CACTAMRTCCTTM NNNCACTAATTANTNN |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CACTAMRTCCTTM --TTAAGTGCTT- |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CACTAMRTCCTTM GGCCATAAATCA--- |
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